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Finding The Cure This is a pretty cool distributed computing project Proteins are biology's workhorses -- its "nanomachines." Before proteins can carry out these important functions, they assemble themselves, or "fold." The process of protein folding, while critical and fundamental to virtually all of biology, in many ways remains a mystery. I thought that SETI@home was an interesting application, but this seems a lot more useful to me. I may set it up to run on my file server, which has a 64-bit AMD CPU that's idle much of the time. It will help justify the electricity costs to run it. Posted by Rand Simberg at November 23, 2007 10:29 AMTrackBack URL for this entry:
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There is also the "Rosetta@home" project, run out of the University of Washington. It is developing the computational methods to translate the amino acid sequence into the finalized protein structure. It doesn't care about calculating the folding mechanics -- just the final result. Small note about Folding@home -- they recently reported linking the GPU's of (IIRC) Playstation 3 to create a 1 petaflop cluster. If that isn't a marketing pitch by the kids to get a current gamebox, I don't know what would. Posted by MG at November 23, 2007 03:10 PMI met some people who were working on the protein folding problem, back in 1986-87. Boy am I glad I'm not in that field. Can you imagine spending your whole career on the same problem, and it still isn't solved? Posted by Bob Hawkins at November 23, 2007 07:34 PMI'm pretty sure Folding using BOINC, just like seti@home does now. Once you have a BOINC client set up, you can participate in a bunch of cool projects. Climate models, gravity wave detector data (einstein@home I think), there was one helping to design detectors for LHC, and I think they are going to process LHC data with one too. There's also a development project called orbit@home which is going to work the NEO problem. wikipedia has good info. Posted by jrman at November 23, 2007 08:22 PMI run BOINC, and hadn't heard of orbit@home. Just tried to sign up, but no dice. Posted by Tom at November 24, 2007 07:10 AMAt one point I was ranked fairly high on SETI@home. I had a dual p3 600MHz machine that could crank out 2 projects a day. It beat the pants off my P4 1.8GHz machine that I mostly used for gaming at the time which could do a project in about 2 1/2 days. Point being, if you get a dual core processor then your project times go down significantly. Posted by Josh Reiter at November 26, 2007 01:03 AMPost a comment |